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soil/examples/newsspread/NewsSpread.ipynb

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{
"cells": [
{
"cell_type": "code",
"execution_count": 1,
"metadata": {
"ExecuteTime": {
"end_time": "2017-10-19T15:54:01.378353Z",
"start_time": "2017-10-19T17:54:00.685043+02:00"
},
"scrolled": false
},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Populating the interactive namespace from numpy and matplotlib\n"
]
}
],
"source": [
"import soil\n",
"import networkx as nx\n",
" \n",
"%load_ext autoreload\n",
"%autoreload 2\n",
"\n",
"# To display plots in the notebook\n",
"%pylab inline\n",
"\n",
"from soil import *"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"# News Spreading example with SOIL"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"In this example we three different kinds of models, which we combine in five types of simulation"
]
},
{
"cell_type": "code",
"execution_count": 2,
"metadata": {
"ExecuteTime": {
"end_time": "2017-10-19T15:54:02.678166Z",
"start_time": "2017-10-19T17:54:02.508949+02:00"
}
},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"---\r\n",
"default_state: {}\r\n",
"load_module: newsspread\r\n",
"environment_agents: []\r\n",
"environment_params:\r\n",
" prob_neighbor_spread: 0.0\r\n",
" prob_tv_spread: 0.01\r\n",
"interval: 1\r\n",
"max_time: 30\r\n",
"name: Sim_all_dumb\r\n",
"network_agents:\r\n",
"- agent_type: DumbViewer\r\n",
" state:\r\n",
" has_tv: false\r\n",
" weight: 1\r\n",
"- agent_type: DumbViewer\r\n",
" state:\r\n",
" has_tv: true\r\n",
" weight: 1\r\n",
"network_params:\r\n",
" generator: barabasi_albert_graph\r\n",
" n: 500\r\n",
" m: 5\r\n",
"num_trials: 50\r\n",
"---\r\n",
"default_state: {}\r\n",
"load_module: newsspread\r\n",
"environment_agents: []\r\n",
"environment_params:\r\n",
" prob_neighbor_spread: 0.0\r\n",
" prob_tv_spread: 0.01\r\n",
"interval: 1\r\n",
"max_time: 30\r\n",
"name: Sim_half_herd\r\n",
"network_agents:\r\n",
"- agent_type: DumbViewer\r\n",
" state:\r\n",
" has_tv: false\r\n",
" weight: 1\r\n",
"- agent_type: DumbViewer\r\n",
" state:\r\n",
" has_tv: true\r\n",
" weight: 1\r\n",
"- agent_type: HerdViewer\r\n",
" state:\r\n",
" has_tv: false\r\n",
" weight: 1\r\n",
"- agent_type: HerdViewer\r\n",
" state:\r\n",
" has_tv: true\r\n",
" weight: 1\r\n",
"network_params:\r\n",
" generator: barabasi_albert_graph\r\n",
" n: 500\r\n",
" m: 5\r\n",
"num_trials: 50\r\n",
"---\r\n",
"default_state: {}\r\n",
"load_module: newsspread\r\n",
"environment_agents: []\r\n",
"environment_params:\r\n",
" prob_neighbor_spread: 0.0\r\n",
" prob_tv_spread: 0.01\r\n",
"interval: 1\r\n",
"max_time: 30\r\n",
"name: Sim_all_herd\r\n",
"network_agents:\r\n",
"- agent_type: HerdViewer\r\n",
" state:\r\n",
" has_tv: true\r\n",
" id: infected\r\n",
" weight: 1\r\n",
"- agent_type: HerdViewer\r\n",
" state:\r\n",
" has_tv: true\r\n",
" id: neutral\r\n",
" weight: 1\r\n",
"network_params:\r\n",
" generator: barabasi_albert_graph\r\n",
" n: 500\r\n",
" m: 5\r\n",
"num_trials: 50\r\n",
"---\r\n",
"default_state: {}\r\n",
"load_module: newsspread\r\n",
"environment_agents: []\r\n",
"environment_params:\r\n",
" prob_neighbor_spread: 0.0\r\n",
" prob_tv_spread: 0.01\r\n",
" prob_neighbor_cure: 0.1\r\n",
"interval: 1\r\n",
"max_time: 30\r\n",
"name: Sim_wise_herd\r\n",
"network_agents:\r\n",
"- agent_type: HerdViewer\r\n",
" state:\r\n",
" has_tv: true\r\n",
" id: infected\r\n",
" weight: 1\r\n",
"- agent_type: WiseViewer\r\n",
" state:\r\n",
" has_tv: true\r\n",
" weight: 1\r\n",
"network_params:\r\n",
" generator: barabasi_albert_graph\r\n",
" n: 500\r\n",
" m: 5\r\n",
"num_trials: 50\r\n",
"---\r\n",
"default_state: {}\r\n",
"load_module: newsspread\r\n",
"environment_agents: []\r\n",
"environment_params:\r\n",
" prob_neighbor_spread: 0.0\r\n",
" prob_tv_spread: 0.01\r\n",
" prob_neighbor_cure: 0.1\r\n",
"interval: 1\r\n",
"max_time: 30\r\n",
"name: Sim_all_wise\r\n",
"network_agents:\r\n",
"- agent_type: WiseViewer\r\n",
" state:\r\n",
" has_tv: true\r\n",
" id: infected\r\n",
" weight: 1\r\n",
"- agent_type: WiseViewer\r\n",
" state:\r\n",
" has_tv: true\r\n",
" weight: 1\r\n",
"network_params:\r\n",
" generator: barabasi_albert_graph\r\n",
" n: 500\r\n",
" m: 5\r\n",
"network_params:\r\n",
" generator: barabasi_albert_graph\r\n",
" n: 500\r\n",
" m: 5\r\n",
"num_trials: 50\r\n"
]
}
],
"source": [
"!cat NewsSpread.yml"
]
},
{
"cell_type": "code",
"execution_count": 3,
"metadata": {
"ExecuteTime": {
"end_time": "2017-10-19T15:54:07.617556Z",
"start_time": "2017-10-19T17:54:03.481983+02:00"
}
},
"outputs": [],
"source": [
"evodumb = analysis.read_data('soil_output/Sim_all_dumb/', group=True, process=analysis.get_count, keys=['id']);"
]
},
{
"cell_type": "code",
"execution_count": 4,
"metadata": {
"ExecuteTime": {
"end_time": "2017-10-19T15:54:07.832237Z",
"start_time": "2017-10-19T17:54:07.620220+02:00"
}
},
"outputs": [
{
"data": {
"text/plain": [
"<matplotlib.axes._subplots.AxesSubplot at 0x7f17bfc78390>"
]
},
"execution_count": 4,
"metadata": {},
"output_type": "execute_result"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f17bfce7e10>"
]
},
"metadata": {},
"output_type": "display_data"
}
],
"source": [
"evodumb['mean'].plot(yerr=evodumb['std'])"
]
},
{
"cell_type": "code",
"execution_count": 5,
"metadata": {
"ExecuteTime": {
"end_time": "2017-10-19T15:54:28.017296Z",
"start_time": "2017-10-19T17:54:07.834047+02:00"
},
"collapsed": true
},
"outputs": [],
"source": [
"evodumb = analysis.read_data('soil_output/Sim_all_dumb/', group=True, process=analysis.get_count, keys=['id']);\n",
"evohalfherd = analysis.read_data('soil_output/Sim_half_herd/', group=True, process=analysis.get_count, keys=['id'])\n",
"evoherd = analysis.read_data('soil_output/Sim_all_herd/', group=True, process=analysis.get_count, keys=['id'])\n",
"evoherdwise = analysis.read_data('soil_output/Sim_wise_herd/', group=True, process=analysis.get_count, keys=['id'])\n",
"evowise = analysis.read_data('soil_output/Sim_all_wise//', group=True, process=analysis.get_count, keys=['id'])"
]
},
{
"cell_type": "code",
"execution_count": 6,
"metadata": {
"ExecuteTime": {
"end_time": "2017-10-19T15:54:28.963822Z",
"start_time": "2017-10-19T17:54:28.020292+02:00"
}
},
"outputs": [
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f17bfb3c278>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f17bfb3c2e8>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f17bfb3cb38>"
]
},
"metadata": {},
"output_type": "display_data"
},
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f17bfb3c5f8>"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
"image/png": "iVBORw0KGgoAAAANSUhEUgAAAX0AAAEKCAYAAAD+XoUoAAAABHNCSVQICAgIfAhkiAAAAAlwSFlz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\nl0K6bITwLh7/Q25Fwf4
"text/plain": [
"<matplotlib.figure.Figure at 0x7f17bf15a438>"
]
},
"metadata": {},
"output_type": "display_data"
}
],
"source": [
"for i in [evodumb, evohalfherd, evoherd, evoherdwise, evowise]:\n",
" i['mean'].plot(yerr=i['std'])"
]
},
{
"cell_type": "code",
"execution_count": 7,
"metadata": {
"ExecuteTime": {
"end_time": "2017-10-19T15:54:29.248966Z",
"start_time": "2017-10-19T17:54:28.966025+02:00"
}
},
"outputs": [
{
"data": {
"image/png": "iVBORw0KGgoAAAANSUhEUgAAAX8AAAEKCAYAAAD6q1UVAAAABHNCSVQICAgIfAhkiAAAAAlwSFlz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\n3gTPTYLqg6Zm30lZIDI
"text/plain": [
"<matplotlib.figure.Figure at 0x7f17bf9f5dd8>"
]
},
"metadata": {},
"output_type": "display_data"
}
],
"source": [
"diff = evodumb['mean']-evohalfherd['mean']\n",
"diff.plot(yerr=evodumb['std']+evohalfherd['std']);"
]
},
{
"cell_type": "code",
"execution_count": 8,
"metadata": {
"ExecuteTime": {
"end_time": "2017-10-19T15:54:29.688734Z",
"start_time": "2017-10-19T17:54:29.251456+02:00"
}
},
"outputs": [
{
"data": {
"text/plain": [
"<matplotlib.axes._subplots.AxesSubplot at 0x7f17bf608518>"
]
},
"execution_count": 8,
"metadata": {},
"output_type": "execute_result"
},
{
"data": {
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},
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"text/plain": [
"<matplotlib.figure.Figure at 0x7f17bfc79ba8>"
]
},
"metadata": {},
"output_type": "display_data"
}
],
"source": [
"evohalfherd['std'].plot()\n",
"evodumb['std'].plot()"
]
}
],
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"kernelspec": {
"display_name": "Python 3",
"language": "python",
"name": "python3"
},
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},
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"name": "python",
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"pygments_lexer": "ipython3",
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},
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},
"moveMenuLeft": true,
"nav_menu": {
"height": "30px",
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},
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"number_sections": true,
"sideBar": true,
"threshold": 4,
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"toc_section_display": "block",
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}
},
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}