mirror of
https://github.com/gsi-upm/sitc
synced 2024-11-16 19:42:28 +00:00
674 lines
20 KiB
Plaintext
674 lines
20 KiB
Plaintext
{
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"cells": [
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{
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"cell_type": "markdown",
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"metadata": {
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"slideshow": {
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"slide_type": "skip"
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}
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},
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"source": [
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"![](images/EscUpmPolit_p.gif \"UPM\")"
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]
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},
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{
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"cell_type": "markdown",
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"metadata": {
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"slideshow": {
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"slide_type": "skip"
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}
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},
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"source": [
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"# Course Notes for Learning Intelligent Systems"
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]
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},
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{
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"cell_type": "markdown",
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"metadata": {
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"slideshow": {
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"slide_type": "skip"
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}
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},
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"source": [
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"Department of Telematic Engineering Systems, Universidad Politécnica de Madrid, © Carlos A. Iglesias"
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]
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},
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{
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"cell_type": "markdown",
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"metadata": {
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"slideshow": {
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"slide_type": "skip"
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}
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},
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"source": [
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"## [Introduction to Preprocessing](00_Intro_Preprocessing.ipynb)"
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]
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},
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{
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"cell_type": "markdown",
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"metadata": {
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"slideshow": {
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"slide_type": "slide"
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}
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},
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"source": [
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"# Datacleaner\n",
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"[Datacleaner](https://github.com/rhiever/datacleaner) supports:\n",
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"\n",
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"* drop rows with missing values\n",
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"* replace missing values with the mode or median on a column-by-column basis\n",
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"* encode non-numeric variables with numerical equivalents\n",
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"\n",
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"\n",
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"Install with\n",
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"\n",
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"**pip install datacleaner**"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 10,
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"metadata": {
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"slideshow": {
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"slide_type": "slide"
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}
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},
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"outputs": [
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{
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"data": {
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"text/html": [
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"<style scoped>\n",
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" .dataframe tbody tr th:only-of-type {\n",
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" vertical-align: middle;\n",
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" }\n",
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"\n",
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" .dataframe tbody tr th {\n",
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" vertical-align: top;\n",
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" }\n",
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"\n",
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" .dataframe thead th {\n",
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" text-align: right;\n",
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" }\n",
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"</style>\n",
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"<table border=\"1\" class=\"dataframe\">\n",
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" <thead>\n",
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" <tr style=\"text-align: right;\">\n",
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" <th></th>\n",
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" <th>PassengerId</th>\n",
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" <th>Survived</th>\n",
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" <th>Pclass</th>\n",
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" <th>Name</th>\n",
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" <th>Sex</th>\n",
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" <th>Age</th>\n",
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" <th>SibSp</th>\n",
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" <th>Parch</th>\n",
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" <th>Ticket</th>\n",
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" <th>Fare</th>\n",
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" <th>Cabin</th>\n",
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" <th>Embarked</th>\n",
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" </tr>\n",
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" </thead>\n",
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" <tbody>\n",
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" <tr>\n",
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" <td>3</td>\n",
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" <td>Braund, Mr. Owen Harris</td>\n",
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" <td>male</td>\n",
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" <td>22.0</td>\n",
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" <td>1</td>\n",
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" <td>0</td>\n",
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" <td>A/5 21171</td>\n",
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" <td>7.2500</td>\n",
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" <td>NaN</td>\n",
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" <td>S</td>\n",
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" <tr>\n",
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" <th>1</th>\n",
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" <td>2</td>\n",
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" <td>1</td>\n",
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" <td>1</td>\n",
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" <td>Cumings, Mrs. John Bradley (Florence Briggs Th...</td>\n",
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" <td>female</td>\n",
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" <td>38.0</td>\n",
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" <td>1</td>\n",
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" <td>0</td>\n",
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" <td>PC 17599</td>\n",
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" <td>71.2833</td>\n",
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" <td>C85</td>\n",
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" <td>C</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>2</th>\n",
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" <td>3</td>\n",
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" <td>1</td>\n",
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" <td>3</td>\n",
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" <td>Heikkinen, Miss. Laina</td>\n",
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" <td>female</td>\n",
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" <td>26.0</td>\n",
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" <td>0</td>\n",
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" <td>0</td>\n",
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" <td>STON/O2. 3101282</td>\n",
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" <td>7.9250</td>\n",
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" <td>NaN</td>\n",
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" <td>S</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>3</th>\n",
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" <td>4</td>\n",
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" <td>1</td>\n",
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" <td>1</td>\n",
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" <td>Futrelle, Mrs. Jacques Heath (Lily May Peel)</td>\n",
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" <td>female</td>\n",
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" <td>35.0</td>\n",
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" <td>1</td>\n",
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" <td>0</td>\n",
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" <td>113803</td>\n",
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" <td>53.1000</td>\n",
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" <td>C123</td>\n",
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" <td>S</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>4</th>\n",
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" <td>5</td>\n",
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" <td>0</td>\n",
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" <td>3</td>\n",
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" <td>Allen, Mr. William Henry</td>\n",
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" <td>male</td>\n",
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" <td>35.0</td>\n",
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" <td>0</td>\n",
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" <td>0</td>\n",
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" <td>8.0500</td>\n",
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" <td>S</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>...</th>\n",
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" <td>...</td>\n",
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" <td>...</td>\n",
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" <td>...</td>\n",
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" <td>...</td>\n",
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" <td>...</td>\n",
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" <td>...</td>\n",
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" <td>...</td>\n",
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" <td>...</td>\n",
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" <td>...</td>\n",
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" <td>...</td>\n",
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" <td>...</td>\n",
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" <td>...</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>886</th>\n",
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" <td>887</td>\n",
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" <td>0</td>\n",
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" <td>2</td>\n",
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" <td>Montvila, Rev. Juozas</td>\n",
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" <td>male</td>\n",
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" <td>27.0</td>\n",
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" <td>0</td>\n",
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" <td>0</td>\n",
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" <td>211536</td>\n",
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" <td>13.0000</td>\n",
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" <td>NaN</td>\n",
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" <td>S</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>887</th>\n",
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" <td>888</td>\n",
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" <td>1</td>\n",
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" <td>1</td>\n",
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" <td>Graham, Miss. Margaret Edith</td>\n",
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" <td>female</td>\n",
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" <td>19.0</td>\n",
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" <td>0</td>\n",
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" <td>0</td>\n",
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" <td>112053</td>\n",
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" <td>30.0000</td>\n",
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" <td>B42</td>\n",
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" <td>S</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>888</th>\n",
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||
" <td>889</td>\n",
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" <td>0</td>\n",
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" <td>3</td>\n",
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" <td>Johnston, Miss. Catherine Helen \"Carrie\"</td>\n",
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" <td>female</td>\n",
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" <td>NaN</td>\n",
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" <td>1</td>\n",
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" <td>2</td>\n",
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||
" <td>W./C. 6607</td>\n",
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" <td>23.4500</td>\n",
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" <td>NaN</td>\n",
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" <td>S</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>889</th>\n",
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" <td>890</td>\n",
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" <td>1</td>\n",
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" <td>1</td>\n",
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" <td>Behr, Mr. Karl Howell</td>\n",
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" <td>male</td>\n",
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" <td>26.0</td>\n",
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||
" <td>0</td>\n",
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||
" <td>0</td>\n",
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||
" <td>111369</td>\n",
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||
" <td>30.0000</td>\n",
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" <td>C148</td>\n",
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" <td>C</td>\n",
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" </tr>\n",
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" <tr>\n",
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" <th>890</th>\n",
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" <td>891</td>\n",
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" <td>0</td>\n",
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" <td>3</td>\n",
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||
" <td>Dooley, Mr. Patrick</td>\n",
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||
" <td>male</td>\n",
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" <td>32.0</td>\n",
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||
" <td>0</td>\n",
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||
" <td>0</td>\n",
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||
" <td>370376</td>\n",
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||
" <td>7.7500</td>\n",
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||
" <td>NaN</td>\n",
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||
" <td>Q</td>\n",
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||
" </tr>\n",
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||
" </tbody>\n",
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"</table>\n",
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"<p>891 rows × 12 columns</p>\n",
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||
"</div>"
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],
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"text/plain": [
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||
" PassengerId Survived Pclass \\\n",
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||
"0 1 0 3 \n",
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||
"1 2 1 1 \n",
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||
"2 3 1 3 \n",
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||
"3 4 1 1 \n",
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||
"4 5 0 3 \n",
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||
".. ... ... ... \n",
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||
"886 887 0 2 \n",
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||
"887 888 1 1 \n",
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||
"888 889 0 3 \n",
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||
"889 890 1 1 \n",
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||
"890 891 0 3 \n",
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||
"\n",
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||
" Name Sex Age SibSp \\\n",
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"0 Braund, Mr. Owen Harris male 22.0 1 \n",
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"1 Cumings, Mrs. John Bradley (Florence Briggs Th... female 38.0 1 \n",
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"2 Heikkinen, Miss. Laina female 26.0 0 \n",
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||
"3 Futrelle, Mrs. Jacques Heath (Lily May Peel) female 35.0 1 \n",
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||
"4 Allen, Mr. William Henry male 35.0 0 \n",
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||
".. ... ... ... ... \n",
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||
"886 Montvila, Rev. Juozas male 27.0 0 \n",
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"887 Graham, Miss. Margaret Edith female 19.0 0 \n",
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"888 Johnston, Miss. Catherine Helen \"Carrie\" female NaN 1 \n",
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||
"889 Behr, Mr. Karl Howell male 26.0 0 \n",
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"890 Dooley, Mr. Patrick male 32.0 0 \n",
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"\n",
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" Parch Ticket Fare Cabin Embarked \n",
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"0 0 A/5 21171 7.2500 NaN S \n",
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"1 0 PC 17599 71.2833 C85 C \n",
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"2 0 STON/O2. 3101282 7.9250 NaN S \n",
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||
"3 0 113803 53.1000 C123 S \n",
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"4 0 373450 8.0500 NaN S \n",
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||
".. ... ... ... ... ... \n",
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"886 0 211536 13.0000 NaN S \n",
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||
"887 0 112053 30.0000 B42 S \n",
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||
"888 2 W./C. 6607 23.4500 NaN S \n",
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||
"889 0 111369 30.0000 C148 C \n",
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||
"890 0 370376 7.7500 NaN Q \n",
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"\n",
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"[891 rows x 12 columns]"
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||
]
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||
},
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||
"execution_count": 10,
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||
"metadata": {},
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||
"output_type": "execute_result"
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||
}
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||
],
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"source": [
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"import pandas as pd\n",
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"import numpy as np\n",
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"\n",
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"from datacleaner import autoclean\n",
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"\n",
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"df = pd.read_csv('https://raw.githubusercontent.com/gsi-upm/sitc/master/ml2/data-titanic/train.csv')\n",
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"df"
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]
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},
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||
{
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"cell_type": "code",
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||
"execution_count": 12,
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||
"metadata": {
|
||
"slideshow": {
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||
"slide_type": "slide"
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}
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},
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"outputs": [
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{
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"data": {
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"text/html": [
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"<div>\n",
|
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"<style scoped>\n",
|
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" .dataframe tbody tr th:only-of-type {\n",
|
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" vertical-align: middle;\n",
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||
" }\n",
|
||
"\n",
|
||
" .dataframe tbody tr th {\n",
|
||
" vertical-align: top;\n",
|
||
" }\n",
|
||
"\n",
|
||
" .dataframe thead th {\n",
|
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" text-align: right;\n",
|
||
" }\n",
|
||
"</style>\n",
|
||
"<table border=\"1\" class=\"dataframe\">\n",
|
||
" <thead>\n",
|
||
" <tr style=\"text-align: right;\">\n",
|
||
" <th></th>\n",
|
||
" <th>PassengerId</th>\n",
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" <th>Survived</th>\n",
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" <th>Pclass</th>\n",
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" <th>Name</th>\n",
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" <th>Sex</th>\n",
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" <th>Age</th>\n",
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" <th>SibSp</th>\n",
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||
" <th>Parch</th>\n",
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||
" <th>Ticket</th>\n",
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" <th>Fare</th>\n",
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" <th>Cabin</th>\n",
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||
" <th>Embarked</th>\n",
|
||
" </tr>\n",
|
||
" </thead>\n",
|
||
" <tbody>\n",
|
||
" <tr>\n",
|
||
" <th>0</th>\n",
|
||
" <td>1</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>3</td>\n",
|
||
" <td>108</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>22.0</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>523</td>\n",
|
||
" <td>7.2500</td>\n",
|
||
" <td>47</td>\n",
|
||
" <td>2</td>\n",
|
||
" </tr>\n",
|
||
" <tr>\n",
|
||
" <th>1</th>\n",
|
||
" <td>2</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>190</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>38.0</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>596</td>\n",
|
||
" <td>71.2833</td>\n",
|
||
" <td>81</td>\n",
|
||
" <td>0</td>\n",
|
||
" </tr>\n",
|
||
" <tr>\n",
|
||
" <th>2</th>\n",
|
||
" <td>3</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>3</td>\n",
|
||
" <td>353</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>26.0</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>669</td>\n",
|
||
" <td>7.9250</td>\n",
|
||
" <td>47</td>\n",
|
||
" <td>2</td>\n",
|
||
" </tr>\n",
|
||
" <tr>\n",
|
||
" <th>3</th>\n",
|
||
" <td>4</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>272</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>35.0</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>49</td>\n",
|
||
" <td>53.1000</td>\n",
|
||
" <td>55</td>\n",
|
||
" <td>2</td>\n",
|
||
" </tr>\n",
|
||
" <tr>\n",
|
||
" <th>4</th>\n",
|
||
" <td>5</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>3</td>\n",
|
||
" <td>15</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>35.0</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>472</td>\n",
|
||
" <td>8.0500</td>\n",
|
||
" <td>47</td>\n",
|
||
" <td>2</td>\n",
|
||
" </tr>\n",
|
||
" <tr>\n",
|
||
" <th>...</th>\n",
|
||
" <td>...</td>\n",
|
||
" <td>...</td>\n",
|
||
" <td>...</td>\n",
|
||
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|
||
" <td>...</td>\n",
|
||
" <td>...</td>\n",
|
||
" <td>...</td>\n",
|
||
" <td>...</td>\n",
|
||
" <td>...</td>\n",
|
||
" <td>...</td>\n",
|
||
" <td>...</td>\n",
|
||
" <td>...</td>\n",
|
||
" </tr>\n",
|
||
" <tr>\n",
|
||
" <th>886</th>\n",
|
||
" <td>887</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>2</td>\n",
|
||
" <td>548</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>27.0</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>101</td>\n",
|
||
" <td>13.0000</td>\n",
|
||
" <td>47</td>\n",
|
||
" <td>2</td>\n",
|
||
" </tr>\n",
|
||
" <tr>\n",
|
||
" <th>887</th>\n",
|
||
" <td>888</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>303</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>19.0</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>14</td>\n",
|
||
" <td>30.0000</td>\n",
|
||
" <td>30</td>\n",
|
||
" <td>2</td>\n",
|
||
" </tr>\n",
|
||
" <tr>\n",
|
||
" <th>888</th>\n",
|
||
" <td>889</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>3</td>\n",
|
||
" <td>413</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>28.0</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>2</td>\n",
|
||
" <td>675</td>\n",
|
||
" <td>23.4500</td>\n",
|
||
" <td>47</td>\n",
|
||
" <td>2</td>\n",
|
||
" </tr>\n",
|
||
" <tr>\n",
|
||
" <th>889</th>\n",
|
||
" <td>890</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>81</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>26.0</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>8</td>\n",
|
||
" <td>30.0000</td>\n",
|
||
" <td>60</td>\n",
|
||
" <td>0</td>\n",
|
||
" </tr>\n",
|
||
" <tr>\n",
|
||
" <th>890</th>\n",
|
||
" <td>891</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>3</td>\n",
|
||
" <td>220</td>\n",
|
||
" <td>1</td>\n",
|
||
" <td>32.0</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>0</td>\n",
|
||
" <td>466</td>\n",
|
||
" <td>7.7500</td>\n",
|
||
" <td>47</td>\n",
|
||
" <td>1</td>\n",
|
||
" </tr>\n",
|
||
" </tbody>\n",
|
||
"</table>\n",
|
||
"<p>891 rows × 12 columns</p>\n",
|
||
"</div>"
|
||
],
|
||
"text/plain": [
|
||
" PassengerId Survived Pclass Name Sex Age SibSp Parch Ticket \\\n",
|
||
"0 1 0 3 108 1 22.0 1 0 523 \n",
|
||
"1 2 1 1 190 0 38.0 1 0 596 \n",
|
||
"2 3 1 3 353 0 26.0 0 0 669 \n",
|
||
"3 4 1 1 272 0 35.0 1 0 49 \n",
|
||
"4 5 0 3 15 1 35.0 0 0 472 \n",
|
||
".. ... ... ... ... ... ... ... ... ... \n",
|
||
"886 887 0 2 548 1 27.0 0 0 101 \n",
|
||
"887 888 1 1 303 0 19.0 0 0 14 \n",
|
||
"888 889 0 3 413 0 28.0 1 2 675 \n",
|
||
"889 890 1 1 81 1 26.0 0 0 8 \n",
|
||
"890 891 0 3 220 1 32.0 0 0 466 \n",
|
||
"\n",
|
||
" Fare Cabin Embarked \n",
|
||
"0 7.2500 47 2 \n",
|
||
"1 71.2833 81 0 \n",
|
||
"2 7.9250 47 2 \n",
|
||
"3 53.1000 55 2 \n",
|
||
"4 8.0500 47 2 \n",
|
||
".. ... ... ... \n",
|
||
"886 13.0000 47 2 \n",
|
||
"887 30.0000 30 2 \n",
|
||
"888 23.4500 47 2 \n",
|
||
"889 30.0000 60 0 \n",
|
||
"890 7.7500 47 1 \n",
|
||
"\n",
|
||
"[891 rows x 12 columns]"
|
||
]
|
||
},
|
||
"execution_count": 12,
|
||
"metadata": {},
|
||
"output_type": "execute_result"
|
||
}
|
||
],
|
||
"source": [
|
||
"df_clean = autoclean(df, copy=True)\n",
|
||
"df_clean"
|
||
]
|
||
},
|
||
{
|
||
"cell_type": "markdown",
|
||
"metadata": {
|
||
"slideshow": {
|
||
"slide_type": "skip"
|
||
}
|
||
},
|
||
"source": [
|
||
"# References\n",
|
||
"* [Cleaning and Prepping Data with Python for Data Science — Best Practices and Helpful Packages](https://medium.com/@rrfd/cleaning-and-prepping-data-with-python-for-data-science-best-practices-and-helpful-packages-af1edfbe2a3), DeFilippi, 2019, \n",
|
||
"* [Data Preprocessing for Machine learning in Python, GeeksForGeeks](https://www.geeksforgeeks.org/data-preprocessing-machine-learning-python/), A. Sharma, 2018.\n",
|
||
"* [Handy Python Libraries for Formatting and Cleaning Data](https://mode.com/blog/python-data-cleaning-libraries), M. Bierly, 2016\n"
|
||
]
|
||
},
|
||
{
|
||
"cell_type": "markdown",
|
||
"metadata": {
|
||
"slideshow": {
|
||
"slide_type": "skip"
|
||
}
|
||
},
|
||
"source": [
|
||
"## Licence\n",
|
||
"The notebook is freely licensed under under the [Creative Commons Attribution Share-Alike license](https://creativecommons.org/licenses/by/2.0/). \n",
|
||
"\n",
|
||
"© Carlos A. Iglesias, Universidad Politécnica de Madrid."
|
||
]
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}
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],
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},
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"window_display": true
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"kernelspec": {
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"display_name": "Python 3 (ipykernel)",
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"language": "python",
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"name": "python3"
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},
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"codemirror_mode": {
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"name": "ipython",
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"version": 3
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"file_extension": ".py",
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|
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"name": "python",
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"nbconvert_exporter": "python",
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"pygments_lexer": "ipython3",
|
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"version": "3.11.7"
|
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},
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"latex_envs": {
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"LaTeX_envs_menu_present": true,
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"autocomplete": true,
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"bibliofile": "biblio.bib",
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"cite_by": "apalike",
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