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Update 2_3_1_Advanced_Visualisation.ipynb
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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""
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""
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"In the previous notebook we developed plots with the [matplotlib](http://matplotlib.org/) plotting library.\n",
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In the previous notebook, we developed plots with the [matplotlib](http://matplotlib.org/) plotting library.\n",
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"\n",
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"This notebook introduces another plotting library, [**seaborn**](https://stanford.edu/~mwaskom/software/seaborn/), which provides advanced facilities for data visualization.\n",
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"\n",
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"*Seaborn* is a library for making attractive and informative statistical graphics in Python. It is built on top of *matplotlib* and tightly integrated with the *PyData* stack, including support for *numpy* and *pandas* data structures and statistical routines from *scipy* and *statsmodels*.\n",
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"*Seaborn* is a library that makes attractive and informative statistical graphics in Python. It is built on top of *matplotlib* and tightly integrated with the *PyData* stack, including support for *numpy* and *pandas* data structures and statistical routines from *scipy* and *statsmodels*.\n",
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"\n",
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"*Seaborn* requires its input to be *DataFrames* (a structure created with the library *pandas*)."
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]
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"A very common way to use this plot colors the observations by a separate categorical variable. For example, the iris dataset has four measurements for each of the three different species of iris flowers.\n",
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"A widespread way to use this plot colors the observations by a separate categorical variable. For example, the iris dataset has four measurements for each of the three different species of iris flowers.\n",
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"\n",
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"We are going to color each class, so that we can easily identify **clustering** and **linear relationships**."
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"We are going to color each class, so we can easily identify **clustering** and **linear relationships**."
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]
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},
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{
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"By default every numeric column in the dataset is used, but you can focus on particular relationships if you want."
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"By default, every numeric column in the dataset is used, but you can focus on particular relationships if you want."
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]
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},
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{
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"metadata": {},
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"outputs": [],
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"source": [
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"# One way we can extend this plot is adding a layer of individual points on top of\n",
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"# One way we can extend this plot is by adding a layer of individual points on top of\n",
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"# it through Seaborn's striplot\n",
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"# \n",
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"# We'll use jitter=True so that all the points don't fall in single vertical lines\n",
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"outputs": [],
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"source": [
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"# A violin plot combines the benefits of the previous two plots and simplifies them\n",
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"# Denser regions of the data are fatter, and sparser thiner in a violin plot\n",
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"# Denser regions of the data are fatter, and sparser thinner in a violin plot\n",
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"sns.violinplot(x=\"species\", y=\"petal length (cm)\", data=iris_df, size=6)"
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]
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},
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"Depending on the data, we can choose which visualisation suits better. the following [diagram](http://www.labnol.org/software/find-right-chart-type-for-your-data/6523/) guides this selection.\n",
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"Depending on the data, we can choose which visualisation suits us better. the following [diagram](http://www.labnol.org/software/find-right-chart-type-for-your-data/6523/) guides this selection.\n",
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"\n",
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"\n",
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""
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""
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]
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},
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{
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"metadata": {},
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"source": [
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"## Licence\n",
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"The notebook is freely licensed under under the [Creative Commons Attribution Share-Alike license](https://creativecommons.org/licenses/by/2.0/). \n",
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"The notebook is freely licensed under the [Creative Commons Attribution Share-Alike license](https://creativecommons.org/licenses/by/2.0/). \n",
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"\n",
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"© Carlos A. Iglesias, Universidad Politécnica de Madrid."
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]
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