You cannot select more than 25 topics Topics must start with a letter or number, can include dashes ('-') and can be up to 35 characters long.
soil/soil/stats.py

107 lines
2.9 KiB
Python

import pandas as pd
from collections import Counter
class Stats:
'''
Interface for all stats. It is not necessary, but it is useful
if you don't plan to implement all the methods.
'''
def __init__(self, simulation):
self.simulation = simulation
def start(self):
'''Method to call when the simulation starts'''
pass
def end(self):
'''Method to call when the simulation ends'''
return {}
def trial(self, env):
'''Method to call when a trial ends'''
return {}
class distribution(Stats):
'''
Calculate the distribution of agent states at the end of each trial,
the mean value, and its deviation.
'''
def start(self):
self.means = []
self.counts = []
def trial(self, env):
df = env[None, None, None].df()
df = df.drop('SEED', axis=1)
ix = df.index[-1]
attrs = df.columns.get_level_values(0)
vc = {}
stats = {
'mean': {},
'count': {},
}
for a in attrs:
t = df.loc[(ix, a)]
try:
stats['mean'][a] = t.mean()
self.means.append(('mean', a, t.mean()))
except TypeError:
pass
for name, count in t.value_counts().iteritems():
if a not in stats['count']:
stats['count'][a] = {}
stats['count'][a][name] = count
self.counts.append(('count', a, name, count))
return stats
def end(self):
dfm = pd.DataFrame(self.means, columns=['metric', 'key', 'value'])
dfc = pd.DataFrame(self.counts, columns=['metric', 'key', 'value', 'count'])
count = {}
mean = {}
if self.means:
res = dfm.groupby(by=['key']).agg(['mean', 'std', 'count', 'median', 'max', 'min'])
mean = res['value'].to_dict()
if self.counts:
res = dfc.groupby(by=['key', 'value']).agg(['mean', 'std', 'count', 'median', 'max', 'min'])
for k,v in res['count'].to_dict().items():
if k not in count:
count[k] = {}
for tup, times in v.items():
subkey, subcount = tup
if subkey not in count[k]:
count[k][subkey] = {}
count[k][subkey][subcount] = times
return {'count': count, 'mean': mean}
class defaultStats(Stats):
def trial(self, env):
c = Counter()
c.update(a.__class__.__name__ for a in env.network_agents)
c2 = Counter()
c2.update(a['id'] for a in env.network_agents)
return {
'network ': {
'n_nodes': env.G.number_of_nodes(),
'n_edges': env.G.number_of_edges(),
},
'agents': {
'model_count': dict(c),
'state_count': dict(c2),
}
}