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soil/soil/agents/Geo.py
J. Fernando Sánchez 78833a9e08 Formatted with black
2022-10-16 17:58:19 +02:00

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Python

from scipy.spatial import cKDTree as KDTree
import networkx as nx
from . import NetworkAgent, as_node
class Geo(NetworkAgent):
"""In this type of network, nodes have a "pos" attribute."""
def geo_search(self, radius, node=None, center=False, **kwargs):
"""Get a list of nodes whose coordinates are closer than *radius* to *node*."""
node = as_node(node if node is not None else self)
G = self.subgraph(**kwargs)
pos = nx.get_node_attributes(G, "pos")
if not pos:
return []
nodes, coords = list(zip(*pos.items()))
kdtree = KDTree(coords) # Cannot provide generator.
indices = kdtree.query_ball_point(pos[node], radius)
return [nodes[i] for i in indices if center or (nodes[i] != node)]