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soil/tests/test_network.py

88 lines
3.1 KiB
Python

from unittest import TestCase
import io
import os
import networkx as nx
from os.path import join
from soil import config, network, environment, agents, simulation
from test_main import CustomAgent
ROOT = os.path.abspath(os.path.dirname(__file__))
EXAMPLES = join(ROOT, "..", "examples")
class TestNetwork(TestCase):
def test_load_graph(self):
"""
Load a graph from file if the extension is known.
Raise an exception otherwise.
"""
G = network.from_topology(join(ROOT, "test.gexf"))
assert G
assert len(G) == 2
with self.assertRaises(AttributeError):
G = network.from_topology(join(ROOT, "unknown.extension"))
print(G)
def test_generate_barabasi(self):
"""
If no path is given, a generator and network parameters
should be used to generate a network
"""
cfg = {"generator": "barabasi_albert_graph"}
with self.assertRaises(Exception):
G = network.from_params(**cfg)
cfg["n"] = 100
cfg["m"] = 10
G = network.from_params(**cfg)
assert len(G) == 100
def test_save_geometric(self):
"""
There is a bug in networkx that prevents it from creating a GEXF file
from geometric models. We should work around it.
"""
G = nx.random_geometric_graph(20, 0.1)
env = environment.NetworkEnvironment(topology=G)
f = io.BytesIO()
assert env.G
network.dump_gexf(env.G, f)
def test_networkenvironment_creation(self):
"""Networkenvironment should accept netconfig as parameters"""
env = environment.Environment(topology=join(ROOT, "test.gexf"))
env.populate_network(CustomAgent)
assert env.G
env.step()
assert len(env.G) == 2
assert len(env.agents) == 2
assert env.agents[1].count_agents(state_id="normal") == 2
assert env.agents[1].count_agents(state_id="normal", limit_neighbors=True) == 1
assert env.agents[0].count_neighbors() == 1
def test_custom_agent_neighbors(self):
"""Allow for search of neighbors with a certain state_id"""
env = environment.Environment()
env.create_network(join(ROOT, "test.gexf"))
env.populate_network(CustomAgent)
assert env.agents[1].count_agents(state_id="normal") == 2
assert env.agents[1].count_agents(state_id="normal", limit_neighbors=True) == 1
assert env.agents[0].count_neighbors() == 1
def test_subgraph(self):
"""An agent should be able to subgraph the global topology"""
G = nx.Graph()
G.add_node(3)
G.add_edge(1, 2)
env = environment.Environment(name="Test", topology=G)
env.populate_network(agents.NetworkAgent)
a2 = env.agent(node_id=2)
a3 = env.agent(node_id=3)
assert len(a2.subgraph(limit_neighbors=True)) == 2
assert len(a3.subgraph(limit_neighbors=True)) == 1
assert len(a3.subgraph(limit_neighbors=True, center=False)) == 0
assert len(a3.subgraph(agent_class=agents.NetworkAgent)) == 3