from unittest import TestCase import io import os import networkx as nx from os.path import join from soil import config, network, environment, agents, simulation from test_main import CustomAgent ROOT = os.path.abspath(os.path.dirname(__file__)) EXAMPLES = join(ROOT, "..", "examples") class TestNetwork(TestCase): def test_load_graph(self): """ Load a graph from file if the extension is known. Raise an exception otherwise. """ config = {"network_params": {"path": join(ROOT, "test.gexf")}} G = network.from_config(config["network_params"]) assert G assert len(G) == 2 with self.assertRaises(AttributeError): config = {"network_params": {"path": join(ROOT, "unknown.extension")}} G = network.from_config(config["network_params"]) print(G) def test_generate_barabasi(self): """ If no path is given, a generator and network parameters should be used to generate a network """ cfg = {"params": {"generator": "barabasi_albert_graph"}} with self.assertRaises(Exception): G = network.from_config(cfg) cfg["params"]["n"] = 100 cfg["params"]["m"] = 10 G = network.from_config(cfg) assert len(G) == 100 def test_save_geometric(self): """ There is a bug in networkx that prevents it from creating a GEXF file from geometric models. We should work around it. """ G = nx.random_geometric_graph(20, 0.1) env = environment.NetworkEnvironment(topology=G) f = io.BytesIO() assert env.G network.dump_gexf(env.G, f) def test_networkenvironment_creation(self): """Networkenvironment should accept netconfig as parameters""" model_params = { "topology": {"path": join(ROOT, "test.gexf")}, "agents": { "topology": True, "distribution": [ { "agent_class": CustomAgent, } ], }, } env = environment.Environment(**model_params) assert env.G env.step() assert len(env.G) == 2 assert len(env.agents) == 2 assert env.agents[1].count_agents(state_id="normal") == 2 assert env.agents[1].count_agents(state_id="normal", limit_neighbors=True) == 1 assert env.agents[0].neighbors == 1 def test_custom_agent_neighbors(self): """Allow for search of neighbors with a certain state_id""" config = { "model_params": { "topology": {"path": join(ROOT, "test.gexf")}, "agents": { "topology": True, "distribution": [{"weight": 1, "agent_class": CustomAgent}], }, }, "max_time": 10, } s = simulation.from_config(config) env = s.run_simulation(dry_run=True)[0] assert env.agents[1].count_agents(state_id="normal") == 2 assert env.agents[1].count_agents(state_id="normal", limit_neighbors=True) == 1 assert env.agents[0].neighbors == 1 def test_subgraph(self): """An agent should be able to subgraph the global topology""" G = nx.Graph() G.add_node(3) G.add_edge(1, 2) distro = agents.calculate_distribution(agent_class=agents.NetworkAgent) aconfig = config.AgentConfig(distribution=distro, topology=True) env = environment.Environment(name="Test", topology=G, agents=aconfig) lst = list(env.network_agents) a2 = env.find_one(node_id=2) a3 = env.find_one(node_id=3) assert len(a2.subgraph(limit_neighbors=True)) == 2 assert len(a3.subgraph(limit_neighbors=True)) == 1 assert len(a3.subgraph(limit_neighbors=True, center=False)) == 0 assert len(a3.subgraph(agent_class=agents.NetworkAgent)) == 3