Map added

TerroristNetworkModel.yml

@@ -1,6 +1,6 @@
 name: TerroristNetworkModel_sim
 load_module: TerroristNetworkModel
-max_time: 100
+max_time: 150
 num_trials: 1
 network_params:
   generator: random_geometric_graph
@@ -30,7 +30,7 @@ environment_params:
   # TerroristSpreadModel
   information_spread_intensity: 0.7
   terrorist_additional_influence: 0.035
-  max_vulnerability: 0.5
+  max_vulnerability: 0.6
   prob_interaction: 0.5
 
   # TrainingAreaModel and HavenModel
@@ -38,7 +38,7 @@ environment_params:
   haven_influence: 0.20
 
   # TerroristNetworkModel
-  vision_range: 0.50
+  vision_range: 0.30
   sphere_influence: 2
   weight_social_distance: 0.035
   weight_link_distance: 0.035
@@ -49,10 +49,12 @@ visualization_params:
   shapes:
     TrainingAreaModel: target
     HavenModel: home
+    TerroristNetworkModel: person
   colors:
     - attr_id: 0
-      color: green
+      color: '#40de40'
     - attr_id: 1
       color: red
     - attr_id: 2
       color: '#c16a6a'
+  background_image: 'map.png'

run.py

@@ -14,7 +14,7 @@ if __name__ == "__main__":
 
     parser = argparse.ArgumentParser(description='Visualization of a Graph Model')
 
-    parser.add_argument('--name', '-n', nargs=1, default='SOIL Model', help='name of the simulation')
+    parser.add_argument('--name', '-n', nargs=1, default='SOIL', help='name of the simulation')
     parser.add_argument('--dump', '-d', help='dumping results in folder output', action='store_true')
     parser.add_argument('--verbose', '-v', help='verbose mode', action='store_true')
     args = parser.parse_args()

server.py

@@ -94,10 +94,11 @@ class SocketHandler(tornado.websocket.WebSocketHandler):
 
             settings = []
             for key in self.config['environment_params']: 
-                if type(self.config['environment_params'][key]) == float:
-                    setting_type = 'number'
-                elif type(self.config['environment_params'][key]) == int:
+                if type(self.config['environment_params'][key]) == float or type(self.config['environment_params'][key]) == int:
+                    if self.config['environment_params'][key] <= 1:
                         setting_type = 'number'
+                    else:
+                        setting_type = 'great_number'
                 elif type(self.config['environment_params'][key]) == bool:
                     setting_type = 'boolean'
                 else:
@@ -122,7 +123,6 @@ class SocketHandler(tornado.websocket.WebSocketHandler):
         elif msg['type'] == 'run_simulation':
             if self.application.verbose:
                 logger.info('Running new simulation for {name}'.format(name=self.config['name']))
-                print(msg['data'])
             self.send_log('INFO.soil', 'Running new simulation for {name}'.format(name=self.config['name']))
             self.config['environment_params'] = msg['data']
             self.run_simulation()
@@ -209,7 +209,7 @@ class ModularServer(tornado.web.Application):
     settings = {'debug': True,
                 'template_path': os.path.dirname(__file__) + '/templates'}
 
-    def __init__(self, model, visualization_element, name='SOIL Model', verbose=True,
+    def __init__(self, model, visualization_element, name='SOIL', verbose=True,
                  *args, **kwargs):
         
         self.verbose = verbose

templates/css/main.css

@@ -33,6 +33,25 @@ html, body {
   cursor: pointer;
 }
 
+.wrapper-heading {
+  display: flex;
+  flex-direction: row;
+  padding: 0 !important;
+}
+
+.soil_logo {
+  padding: 0 !important;
+  border-left: none !important;
+  border-right: none !important;
+  display: flex;
+  justify-content: flex-end;
+  background-color: rgb(88, 88, 88);
+}
+
+.soil_logo > img {
+  max-height: 100%;
+}
+
 .node {
   stroke: #fff;
   stroke-width: 1.5px;
@@ -292,7 +311,7 @@ table#link-distance .max {
 
 /* Console */
 
-#update, .console  {
+#update, .console, .soil_logo  {
   padding: 10px 15px;
   height: 135px;
   border: 1px solid #585858;
@@ -317,6 +336,7 @@ table#link-distance .max {
   overflow: auto;
   border-top-left-radius: 5px;
   border-bottom-left-radius: 5px;
+  width: 100%;
 }
 
 .console::-webkit-scrollbar {

templates/index.html

@@ -74,7 +74,7 @@
             );
 
             if ( file['type'] !== "application/x-yaml" ) {
-                console.log('File format not supported. Sorry for the inconvenience.');
+                console.error('File format not supported. Sorry for the inconvenience.');
                 _socket.error('File format not supported. Sorry for the inconvenience.');
                 return;
             } else {
@@ -142,14 +142,22 @@
 
 <div class="container-fluid fixed">
 
+    <div class="col-sm-9 wrapper-heading">
         <!-- CONSOLE -->
-    <div class="col-sm-9 console">
+        <div class="console">
             Please, upload a YAML file that defines all the parameters of a simulation. <br/>
             If you don't know how to write the file, please visit this page:<br/>
             http://soilsim.readthedocs.io/en/latest/quickstart.html<br/>
         </div>
         <!-- //CONSOLE -->
 
+        <!-- SOIL Logo -->
+        <div class="soil_logo" >
+            <img src="img/logo_soil.png" />
+        </div>
+        <!-- //SOIL Logo -->
+    </div>
+
     <div id="update" class="col-sm-3">
         <!-- Load File -->
         <form enctype="multipart/form-data">
@@ -210,7 +218,7 @@
             <div class="container-fluid">
 
                 <div id="graph_container">
-                    <svg id="graph" class="col-sm-9"></svg>
+                    <svg id="graph" class="col-sm-9" xmlns="http://www.w3.org/2000/svg"></svg>
                 </div>
 
                 <div id="configuration" class="col-sm-3">

templates/js/socket.js

@@ -26,12 +26,12 @@ ws.onmessage = function(message) {
             self.GraphVisualization.import(convertJSON(msg['data']), function() {
                 reset_configuration();
                 set_configuration();
-                $('#home_menu').click(function() {
-                    setTimeout(function() {
-                        reset_timeline();
-                        set_timeline(msg['data']);
-                    }, 1000);
-                });
+                // $('#home_menu').click(function() {
+                //     setTimeout(function() {
+                //         reset_timeline();
+                //         set_timeline(msg['data']);
+                //     }, 1000);
+                // });
                 reset_timeline();
                 set_timeline(msg['data']);
                 $('#load').hide();
@@ -52,7 +52,7 @@ ws.onmessage = function(message) {
             break;
 
         case 'error':
-            console.log(msg['error']);
+            console.error(msg['error']);
             _socket.error(msg['error']);
             $('#load').removeClass('loader');
             break;
@@ -65,10 +65,18 @@ ws.onmessage = function(message) {
         case 'visualization_params':
             console.log(msg['data']);
             self.GraphVisualization.set_params(msg['data']['shape_property'], msg['data']['shapes'], msg['data']['colors']);
+
+            if ( msg['data']['background_image'] ) {
+                // $('svg#graph').css('background-image', 'linear-gradient(to bottom, rgba(0,0,0,0.4) 0%,rgba(0,0,0,0.4) 100%), url(img/background/' + msg['data']['background_image'])
+                //               .css('background-size', '130%').css('background-position', '5% 30%').css('background-repeat', 'no-repeat');
+                $('<style>').text('svg line.link { stroke: white !important; stroke-width: 1.5px !important; }').appendTo($('html > head'));
+                $('<style>').text('svg circle.node { stroke-width: 2.5px !important; }').appendTo($('html > head'));
+                self.GraphVisualization.set_background('img/background/' + msg['data']['background_image']);
+            }
             break;
 
         default:
-            console.log('Unexpected message!')
+            console.warn('Unexpected message!')
     }
 
 }
@@ -111,8 +119,8 @@ var reset_trials = function() {
 var convertJSON = function(json) {
     // For NetworkX Geometric Graphs get positions
     json.nodes.forEach(function(node) {
-        var scx = d3.scale.linear().domain([0, 1]).range([0, height]);
-        var scy = d3.scale.linear().domain([0, 1]).range([height, 0]);
+        var scx = d3.scale.linear().domain([0, 1]).range([0, width]);
+        var scy = d3.scale.linear().domain([0, 1]).range([width, 0]);
         if ( node.pos ) {
             node.scx = scx(node.pos[0]);
             node.scy = scy(node.pos[1]);
@@ -227,7 +235,14 @@ var set_timeline = function(graph) {
     // Draw graph for the first time
     self.GraphVisualization.update_graph($('.config-item #properties').val(), maxUnix, function() {
         update_statistics_table();
+        $('svg #root > image').attr('height', d3.select('#root').node().getBBox().height)
         setTimeout(function() {           
+            if ( $('svg #root > image').length !== 0 ) {
+                $('svg #root > image').attr('height', d3.select('#root').node().getBBox().height * 1.2);
+                var dx = d3.select('#graph-wrapper').node().getBBox().width - d3.select('svg #root > image').node().getBBox().width;
+                var dy = d3.select('#graph-wrapper').node().getBBox().height - d3.select('svg #root > image').node().getBBox().height;
+                $('svg #root > image').attr('transform', 'translate(' + (dx / 2) + ',' + (dy / 2) + ')');
+            }
             self.GraphVisualization.fit(); 
         }, 100);
     });
@@ -397,7 +412,11 @@ var run_simulation = function() {
             case 'checkbox':
                 environment_variables[this.id] = ($(this).is(':checked')) ? true : false;
                 break;
+            case 'number':
+                environment_variables[this.id] = Number(this.value);
+                break;
             default:
+                console.warn(this.id +  ' not defined when running simulation!');
                 break;
         }
         

templates/js/template.js

@@ -64,6 +64,13 @@ var initGUI = function(model_params) {
         });
     };
 
+    var addNumberInput = function(name, value) {
+        var wrapper = $('<div>').attr('class', 'col-sm-6').height('110px');
+        var label   = $('<div>').width('100%').text(name).css('text-align', 'center').css('font-weight', 'bolder').appendTo(wrapper);
+        var input   = $('<input>').attr('id', name).attr('type', 'number').attr('class', 'form-control').attr('value', value).attr('min', 0).css('margin-top', '18px').appendTo(wrapper);
+        $('#wrapper-settings').append(wrapper);
+    }
+
     var addTextBox = function(param, obj) {
         var well = $('<div class="well">' + obj.value + '</div>')[0];
         sidebar.append(well);
@@ -81,8 +88,11 @@ var initGUI = function(model_params) {
             case 'number':
                 addSliderInput(model_params[option]['label'], model_params[option]['value']);
                 break;
+            case 'great_number':
+                addNumberInput(model_params[option]['label'], model_params[option]['value']);
+                break;
             default:
-                console.log(model_params[option]['label'] + ' not defined!');
+                console.warn(model_params[option]['label'] + ' not defined!');
                 break;
         }
     }

templates/js/visualization.js

@@ -14,6 +14,7 @@
   // Private constants
   var focus_opacity = 0.1,
       radius = 8,
+      shape_size = 16,
       required_node = ['id', 'index', 'label', 'px', 'py', 'spells', 'weight', 'x', 'y', 'pos', 'scx', 'scy'];
 
   // Private variables
@@ -29,8 +30,10 @@
       zoom,               // Zoom
 
       groot,              // Append sections to svg to have nodes and edges separately
+      graph_wrapper,
       glinks,
       gnodes,
+      background_image,
       data_node,          // Actual node data for the graph
       data_link,          // Actual link data for the graph
 
@@ -38,7 +41,8 @@
       node,               // Circles for the nodes
       shape_property,     // Property to whom the shape will be applied
       shapes,             // Dictionary of shapes for nodes
-      colors;             // Dictionary of colors for nodes
+      colors,             // Dictionary of colors for nodes
+      background;         // Background of the graph
 
   Number.prototype.between = function(min, max) {
     var min = (min || min === 0) ? min : Math.max(),
@@ -221,9 +225,18 @@
                      .size([width, height]);
 
     // Append sections to svg to have nodes and edges separately
-    groot =  svg.append('g')    .attr('id', 'root');
+    groot  = svg.append('g').attr('id', 'root');
+
+    // Set background
+    if ( background !== undefined ) {
+      background_image = groot.append('image').attr('href', background).style('opacity', '0.8');
+      graph_wrapper = groot.append('g')   .attr('id', 'graph-wrapper');
+      glinks = graph_wrapper.append('g')  .attr('id', 'links');
+      gnodes = graph_wrapper.append('g')  .attr('id', 'nodes');
+    } else {
       glinks = groot.append('g')  .attr('id', 'links');
       gnodes = groot.append('g')  .attr('id', 'nodes');
+    }
 
     // Add patterns for shapes
     var defs = [];
@@ -245,8 +258,8 @@
        .attr('href', function(d) {
           return window.location.protocol + '//' + window.location.host + '/img/svg/' + d + '.svg';
        })
-       .attr('width', 16)
-       .attr('height', 16);
+       .attr('width', shape_size)
+       .attr('height', shape_size);
 
     // Zoom
     zoom = d3.behavior
@@ -447,10 +460,25 @@
       radius = r(distance);
       node.attr('r', radius);
 
+      var s = d3.scale.linear().domain([30, 1000]).range([16, 48]);
+      if ( shapes instanceof Object && shape_property ) {
+        svg.selectAll('pattern image').attr('width', s(distance)).attr('height', s(distance));
+      }
+
       if (callback) { callback(radius); }
     }
   }
 
+  /**
+   * Set background image.
+   * A function that set a background image.
+   *
+   * @param   {object}    image         Path to image.
+   */
+  function set_background(image) {
+    background = image;
+  }
+
   /**
    * Set property and instant of time.
    * A function that draws the graph depends on the property and instant of time selected.
@@ -623,6 +651,7 @@
     update_graph: update_graph,
     set_params: set_params,
     set_link_distance: set_link_distance,
+    set_background: set_background,
     fit: zoom_to_fit,
     reset: reset,